An Act Making Appropriations for Law Enforcement and for Other Purposes, 2016 Commerce, Justice, Science, and Related Agencies Appropriations Act, 2016 Provides FY2016 appropriations to: the Department of Commerce; the Department of Justice (DOJ); science agencies, including the National Aeronautics and Space Administration (NASA) and the National Science Foundation (NSF); the Department of Homeland Security (DHS); and several related agencies. Department of Commerce Appropriations Act, 2016 Provides appropriations to the Department of Commerce for the International Trade Administration, the Office of the U.S. Trade Representative, the Bureau of Industry and Security, the Economic Development Administration, the Minority Business Development Agency, Economic and Statistical Analysis, the Bureau of the Census, the National Telecommunications and Information Administration, the U.S Patent and Trademark Office, the National Institute of Standards and Technology, the National Oceanic and Atmospheric Administration, and Departmental Management. Department of Justice Appropriations Act, 2016 Provides appropriations to DOJ for: General Administration; the U.S. Parole Commission; Legal Activities; the U.S. Marshals Service; the National Security Division; Interagency Law Enforcement; the Federal Bureau of Investigation; the Drug Enforcement Administration; the Bureau of Alcohol, Tobacco, Firearms, and Explosives; and the Federal Prison System. Provides appropriations to DOJ for State and Local Law Enforcement Activities, including the Office on Violence Against Women, the Office of Justice Programs, and Community Oriented Policing Services (COPS). Science Appropriations Act, 2016 Provides appropriations to the Office of Science and Technology Policy, NASA, and the NSF. Provides appropriations to related agencies, including the Commission on Civil Rights, the Equal Employment Opportunity Commission, the U.S. International Trade Commission, the Legal Services Corporation, the Marine Mammal Commission, and the State Justice Institute. Department of Homeland Security Appropriations Act, 2016 Provides FY2016 appropriations to the Department of Homeland Security (DHS). Provides appropriations for Departmental Management and Operations for the Office of the Secretary and Executive Management, the Office of the Under Secretary for Management, the Office of the Chief Financial Officer, the Office of the Chief Information Officer, Analysis and Operations, and the Office of Inspector General. Provides appropriations for Security, Enforcement, and Investigations for the U.S. Customs and Border Protection, the U.S. Immigration and Customs Enforcement, the Transportation Security Administration, the U.S. Coast Guard, and the U.S. Secret Service. Provides appropriations for Protection, Preparedness, Response, and Recovery for the National Protection and Programs Directorate, the Office of Health Affairs, and the Federal Emergency Management Agency. Provides appropriations for Research, Development, Training, and Services for the U.S. Citizen and Immigration Services, the Federal Law Enforcement Training Center, Science and Technology, and the Domestic Nuclear Detection Office. Sets forth permissible, restricted, and prohibited uses for funds provided by this and other appropriations Acts.